Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTMENSSNVAQSSKWKLPIMIAGFVIVVALVFYFVFEGTKNDITIVNAGEKIESRTHAKTVSEALDEAGIKVSERDEIAPGKNAEIKDGMEIKYLPARQITINDNGTKKDVWSTKANVADLLKDENITTRPQDVLNVALDTKLKNGLEVNINRAIQLSLQNGAKKDTVWTTKTKVSDLLAEKNIKLDQDDRVSPAKDSNLKEKMTVEVTYVNSKAEKKNEQVKFETVYKEDDSLNKGVEKVVQEGKNGKKVVEYKVTFENGKEKKRDVIKENVTSNKTDKVVVRGTKEKVVATPVSNVSTSSATSSSSSSASSTPSGGKTYKMESTAYSGG----GTTAYGINLSANPGLKV-------IAVDPRIIPLGSKVWVEGYGEAIAGDTGGAIKGNIVDVYFPNESQCYS-WGRRMVTVKVLN |
4WLI Chain:A ((15-113)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVTATGYTAGGKNPGDPLYGLTYS---GVKVKRDLYSTVAADPSVFPIGTILFIPNYGLGVVADTGSAIKGNRLDLYFETVKDVYNEWGKKTLDVYVI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WLI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36453 for 478 contacts (-76.3/contact) +
2D Compatibility (PS) -9416 + (NN) -3913 + (LL) 20056
1D Compatibility (HY) -10000 + (ID) 1650
Total energy: -41376.0 ( -86.56 by residue)
QMean score : 0.399
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