Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKTIASIKTNLDSRLGKALTLKANGGRKKTIERCGILAETYPSVFIVELDQDENNFERVSYSYTDILTDAVELVFTDDNKELAL
4J29 Chain:A ((80-114))
--------------------------------------------VLVIMVDQDQEELERI---YEQLKKDGVDVRVTDNEDE---
General information:
TITO was launched using:
RESULT:
Template:
4J29.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3383 for 119 contacts (-28.4/contact) +
2D Compatibility (PS) -3888 + (NN) -1418 + (LL) 3024
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -10265.0 ( -86.26 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_4J29.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J29-query.scw
PDB file :
Tito_Scwrl_4J29.pdb
: