Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPDYDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGKVKEI---------AEQGQVQNGVSSFSVIISLDKTDDLKAGMTADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVIL-PTQETSTVPGAPS |
| 4DK1 Chain:A ((179-332)) | ---------------------------------------------------------TPTIIKVADLSKMRIKPEISEGDITKVKAGQDVTFTILSDNKTVYHAKIDSVDPATTTISD-------SAVYYYANIIVENPEHVLRIGMTTENNIKIADVQNVLFIPNLAVQ---------------------------EIGVQNDFQTEVKSGLTEGEKVVIS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 30565 for 618 contacts (49.5/contact) +
2D Compatibility (PS) -11795 + (NN) 3939 + (LL) 7804
1D Compatibility (HY) 6800 + (ID) 250
Total energy: 37063.0 ( 59.97 by residue)
QMean score : 0.030
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