Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
2H6C Chain:A ((23-223))
-----EKLRNYTDMGIIR--EFAKGSAIIMPGEDTTSMIFLMDGKIKLDIIFEDGS-EKLLYYAGSNSLIGRLYPTGNNI----YATAMEQTRTCWFSEECLRVIFRTDEDMIFEIFKNYLTKVAYYARQVAEINTYNPTIRILRLFYELCSSQGKRVGDTYEITMP-LSQKSIGEITG-AHHVTVSKVLACLKKENILDKKKNKFIVYNLEELK----------------------
General information:
TITO was launched using:
RESULT:
Template:
2H6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115326 for 1356 contacts (-85.0/contact) +
2D Compatibility (PS) -21399 + (NN) -4846 + (LL) 2140
1D Compatibility (HY) -12800 + (ID) 2600
Total energy: -154831.0 ( -114.18 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_2H6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H6C-query.scw
PDB file :
Tito_Scwrl_2H6C.pdb
: