Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIKGRLIFFFVVLVIALCSVLILLIIKISVWKDEPFHLSDAKEIECLGSCEIKNTNQKIHFFSIKENLFEEK-GDIAGILNEDEQKVADKSIFIVILDDEKGIANEE
4K1P Chain:A ((80-121))
------------------------------------------------------DLNQEMMRYSIRFNSYYSKLYELAGNINEDEQSKAD------------------
General information:
TITO was launched using:
RESULT:
Template:
4K1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4509 for 142 contacts (31.8/contact) +
2D Compatibility (PS) -3686 + (NN) -1663 + (LL) 7244
1D Compatibility (HY) -800 + (ID) 750
Total energy: 4854.0 ( 34.18 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_4K1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K1P-query.scw
PDB file :
Tito_Scwrl_4K1P.pdb
: