Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MICQRCGENKAVIALQQLNELGKVESLYLCENCATDEALSSEKDLVKAMDTFSEVALDFLTLLQKEENTQKEVVCENCQLSFEEFLKTNRVGCPECYSAFEA--QLVPIIGRVQNGYKKHIGKVPAEVERAEGVQNEISRLQEKLAKLVKNEEFEEAAVVRDEIKALKAGGEDK |
5BN4 Chain:A ((486-560)) | ----------------------------------------------------------------------------------EGFLQQDAFDENDSYSPLEKTIELMRIIHKYYVTVKQLLGKIPLEEIEQKGIHEKIIKLRYKSLK-----EF------REEIKAIE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BN4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1292 for 416 contacts (-3.1/contact) +
2D Compatibility (PS) -7652 + (NN) -2125 + (LL) 8372
1D Compatibility (HY) -6000 + (ID) 1200
Total energy: -9897.0 ( -23.79 by residue)
QMean score : 0.321
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