Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VDNSVNQEELAMLELARSGDTEALEYFFSKYQSVIYWKSTQYFLQGAERDDLIQEAMIGLFKAIRDYDKTKEASFRSFAEMCINRQLLSAVKRASRQKNIPLNNSVSLDTPMAEDDVDWTLLDVISEKAAETPEDFLIKNEDLTHVARQLEQVTSEFEKEVLKQYLEGKSYQEMALFFNKKEKAIDNALQRVKKKMMKQLE |
| 4LJZ Chain:F ((302-364)) | ----------------------------------------KYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVH-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13750 for 348 contacts (-39.5/contact) +
2D Compatibility (PS) -6767 + (NN) -3760 + (LL) 11712
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -18665.0 ( -53.64 by residue)
QMean score : 0.538
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