Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIKSISKSELEVMKIIWDFGRAVQYADVAGKLEE--KNYSWKKNTVLTFLTRLVEKNLLSVKKVGRKNEYYALVSENEYLERQTETFVEEIYEGDVKGLITNLVQNDLISPDELEDLQQFWKRMKSPNE
1SAX Chain:A ((8-117))
-----ISSAEWEVMNIIW----MKKYASANNIIEEIQMQKDWSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGGFNSLVLNFVEKEDLSQDEIEELR-----------
General information:
TITO was launched using:
RESULT:
Template:
1SAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42295 for 643 contacts (-65.8/contact) +
2D Compatibility (PS) -11422 + (NN) -735 + (LL) 1276
1D Compatibility (HY) -10400 + (ID) 1900
Total energy: -65476.0 ( -101.83 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_1SAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SAX-query.scw
PDB file :
Tito_Scwrl_1SAX.pdb
: