Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLSDFLNSGWESVLVVLGIVGVIINFLSKAGKGTEEENKKAPQPRPNLRSMHQASRTQTTKKPEKRKVSQGTFTQNKEQDKVIAEQKAAQQKMLREIRRESDVAKGKNIIKSTSSHQKKARKLRGRLQEAIITKEILDKPVSLRKNHL
2WWB Chain:B ((40-56))
----------TAIGFAIMGFIGFFVKL--------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6748 for 63 contacts (-107.1/contact) +
2D Compatibility (PS) -1577 + (NN) 236 + (LL) 8592
1D Compatibility (HY) -2400 + (ID) 100
Total energy: -1997.0 ( -31.70 by residue)
QMean score : -0.237
(partial model without unconserved sides chains):
PDB file :
Tito_2WWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WWB-query.scw
PDB file :
Tito_Scwrl_2WWB.pdb
: