Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRQTEFTLLIVGASLSILTFLGAMLYTIIFGLNTLMVADTFGYYSSSEETILLGIITFFSVVAAFFALGSAVFGFIGAFKVKSDGPKVKTLGVCFIVLGGLQVFTIHGILFLIAGILTITKKEYKTNSKEDEGTKWE
3DL8 Chain:E ((44-72))
-VGGVETILTKATYWLGALFLVLALLLSVI------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5819 for 105 contacts (-55.4/contact) +
2D Compatibility (PS) -2826 + (NN) -407 + (LL) 8124
1D Compatibility (HY) -2000 + (ID) 100
Total energy: -3028.0 ( -28.84 by residue)
QMean score : -0.342
(partial model without unconserved sides chains):
PDB file :
Tito_3DL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DL8-query.scw
PDB file :
Tito_Scwrl_3DL8.pdb
: