Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFLTFEDGAR-LEIMSRTDVTGKTT-GENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGD--GYYESVVLDPEGNRIEITW
2P25 Chain:A ((5-124))
-EIHHVAINASNYQATKNFYVEKLGFEV--LRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSYPEALGLRHLAFKV---EHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDGLPLEL--
General information:
TITO was launched using:
RESULT:
Template:
2P25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19102 for 712 contacts (-26.8/contact) +
2D Compatibility (PS) -12769 + (NN) -8043 + (LL) 528
1D Compatibility (HY) -6000 + (ID) 1600
Total energy: -46986.0 ( -65.99 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_2P25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P25-query.scw
PDB file :
Tito_Scwrl_2P25.pdb
: