Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRQYMKMVRPFDFVIIILLILGSFLPLILFSVAEAKHVGDDVVAIISQDGKVIREIPLTGHKGNEQFTIKGKGAQYNLMEVDGERIRIKEDNSPDQVGVKMGWKSKAGDT-IVCLPHKVFVEIKSTNKKSKDPDTDLIVPN
4OBI Chain:A ((14-97))
-------------------------------------------AVLKVDNKVIKVFDLKKDGPHYTYKYEAKDGDYNLIEVDGDRIRVKEANCADLVDVRRGWISKPGETPIACLPHNLFITVEASD--------------
General information:
TITO was launched using:
RESULT:
Template:
4OBI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24791 for 550 contacts (-45.1/contact) +
2D Compatibility (PS) -8914 + (NN) -3126 + (LL) 4648
1D Compatibility (HY) -8800 + (ID) 1750
Total energy: -42733.0 ( -77.70 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_4OBI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OBI-query.scw
PDB file :
Tito_Scwrl_4OBI.pdb
: