Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVKDILTKELVVFDLEATTKETAIEEMAEMLDERGILADKATYVQAVLEREAHSTTGIGNNIAIPHGKSESVTKSAIVFARTKEMIEWESLDDEPVNMIFLLAITDSDKTDGHLKILAEIATKLMDDDIVESLKNTRDKEEVIRILNGGVVEI
4GQX Chain:A ((19-158))
-----ILPLENVVIDLSVTSKKRVFEQAGLIFENQNGIA-RSTVTDNLFARERLGSTGLGEGVAIPHGRIKGLKHPLAAFVRLAEPIPFEAPDGQPVSLLIFLLVPE-QATQAHLEILSEIAQLLSDRDTRERLHTEPDRDELHRLL-------
General information:
TITO was launched using:
RESULT:
Template:
4GQX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83645 for 1083 contacts (-77.2/contact) +
2D Compatibility (PS) -15139 + (NN) -6576 + (LL) 656
1D Compatibility (HY) -9600 + (ID) 2400
Total energy: -116704.0 ( -107.76 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_4GQX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GQX-query.scw
PDB file :
Tito_Scwrl_4GQX.pdb
: