Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVVLEVPVSAPIKDAEKVINAALALIDEK
2R48 Chain:A ((2-97))
---KLLAITSCPNGIAHTYMAAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADRSV-NKDRFIGKKLLSVGVQDGIRKPEELIQKAL------
General information:
TITO was launched using:
RESULT:
Template:
2R48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3060 for 743 contacts (-4.1/contact) +
2D Compatibility (PS) -10231 + (NN) -1712 + (LL) 1200
1D Compatibility (HY) 1200 + (ID) 950
Total energy: -13553.0 ( -18.24 by residue)
QMean score : 0.208
(partial model without unconserved sides chains):
PDB file :
Tito_2R48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R48-query.scw
PDB file :
Tito_Scwrl_2R48.pdb
: