Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSKEKGADLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAPGNRQ---VEHENVINAAKKAGVSYIAYTSFAGADKSTSALAEDHFFTEKVIEKSGIAHTFLRNNWY---FENEMPMIGGALSAGKFVYAAENGKVGWALKREYAEVAAKAVAGAGFPEILE--LSGPLMTYEELTKALKEATGKDF---DVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDALRELLK |
| 2VRB Chain:A ((2-285)) | -SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNE--GLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNF---LVNAGVPEPFAEITAAIYDAISKGEASKTSDDLQKLIGS-LTPLKETVKQAL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142079 for 2236 contacts (-63.5/contact) +
2D Compatibility (PS) -30041 + (NN) -17311 + (LL) 416
1D Compatibility (HY) -15200 + (ID) 5250
Total energy: -209465.0 ( -93.68 by residue)
QMean score : 0.647
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