Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKKLVAWFNGLSKMWKVVVIIGAVFVVIIALTTGEDEGEQTKTKKDSNKVVKTASRPKLSTKDLALIKADLAEFEARELSSEKILKDTIKEESWSDLDFANDNINQMIGTMKRYQQEILSIDAIKRSSEASADTEAFKKIFKEWSEFKIERIQ---VTIDLLNGKKDSEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLDSQK |
4GAX Chain:A ((124-166)) | --------------------------------------------------------------------------------------------------------------------------------------------------FRLMRKQGYFVTCDVFNNHKDESGVFKQSLKNHV---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GAX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1653 for 113 contacts (14.6/contact) +
2D Compatibility (PS) -3015 + (NN) 2105 + (LL) 14260
1D Compatibility (HY) -3600 + (ID) 650
Total energy: 10753.0 ( 95.16 by residue)
QMean score : 0.215
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