Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDKTKKRKWNWAQILAIFVLVTLVVSMVYATVNLITAPSGNVPEGQQTKGDYSLMLMQCVLGVVVLFLPSIISKKMKFVIPNAMYIVFIVFLYCAIYLGEVRSFYYLIPNWDTILHTFSGAMLGGLGFSIVSLLNNDERITLSMSPVFVALFACSFAVFLGVFWEFYEFAADSFGMNMQKTMLEDGTMLQGHAAVADTMGDLFVDFLGAFVISIIGYF-SIRKNKKWMKNFEFKKVDEEVK
1V54 Chain:I ((19-51))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFY---------


General information:
TITO was launched using:
RESULT:

Template: 1V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3395 for 120 contacts (-28.3/contact) +
2D Compatibility (PS) -3265 + (NN) -556 + (LL) 17952
1D Compatibility (HY) 2400 + (ID) 150
Total energy: 12986.0 ( 108.22 by residue)
QMean score : 0.067

(partial model without unconserved sides chains):
PDB file : Tito_1V54.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V54-query.scw
PDB file : Tito_Scwrl_1V54.pdb: