Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFYYHFTDKYDLLTWTYENDFFHCLADG--ITLGNWDKHVLKMLESIKENADFYKNTVSADASILSFCF-SKLTNSLFMDLFEKIDTNATVNEADRVFYAEFFSYGCSGVLIKWITRGFKEAPETIANQLFRLAKDTEFLANSMYREN
3KKC Chain:A ((13-137))
------TKVAIYNAFISLLQENDYSKITVQDVIGLANVGRSTFYSHYESKEVLLKELCEDLFHHLFKQGRDVTFEEYLVHILKHFE---QNQDSIATLLLSDDPYFLLRFRSELEHDVYPRLREEYITKVDIPE-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3KKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61663 for 789 contacts (-78.2/contact) +
2D Compatibility (PS) -12542 + (NN) -4123 + (LL) 5356
1D Compatibility (HY) -11200 + (ID) 1800
Total energy: -85972.0 ( -108.96 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_3KKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KKC-query.scw
PDB file :
Tito_Scwrl_3KKC.pdb
: