Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLTKRIIPCLDVTAGRVVKGVNFVSLTDVGDPVEIAKAYNEAGADELVFLDITATVELRQTMIDVVERTAEQVFIPLTVGGGISSVSDMKELLQAGADKISLNSAAIKRPELIQEGAAKFGNQCIVVAIDAKWNGTNWSVFTRGGRNDTGLDAIEWAKKAVQLGAGEILLTSMDGDGTKNGYDIPLTKAISEAVSVPVIASGGCGNAAHMVEVFEKTKATAALAASIFHYGELSIKNVKTTLLEKGVNIRP
1VH7 Chain:A ((4-251))
-LAKRIIACLDVKDGRVVKGTNFENLRDSGDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEA-FLAGADAALAASVFHFREIDVRELKEYLKKHGVNVR-
General information:
TITO was launched using:
RESULT:
Template:
1VH7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141004 for 2163 contacts (-65.2/contact) +
2D Compatibility (PS) -27260 + (NN) -11244 + (LL) 168
1D Compatibility (HY) -20800 + (ID) 6450
Total energy: -206590.0 ( -95.51 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_1VH7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VH7-query.scw
PDB file :
Tito_Scwrl_1VH7.pdb
: