Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDKKIISALSYFSLFFAPVITPAIIWCTTKDKEIRHHVKWALLTQATFVAGIVVMILLYNNVPFSTNSADTINFLALATVFFIVFLNVSILIFNLIRGITRIVKHSDDNWARC
2EQU Chain:A ((89-105))
-------------------------------------------------------------------------------------------------AGEEVLARWTDCRYYPA
General information:
TITO was launched using:
RESULT:
Template:
2EQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2410 for 53 contacts (-45.5/contact) +
2D Compatibility (PS) -2005 + (NN) -1864 + (LL) 9756
1D Compatibility (HY) 400 + (ID) 100
Total energy: 3777.0 ( 71.26 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_2EQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQU-query.scw
PDB file :
Tito_Scwrl_2EQU.pdb
: