Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSSVHKVASISLFTLAWPIFLEQFLRLMISYIDVFMLGHYSDDAVAATGVANQILVISIIIYGFISVGVQIIVAQMIGAKKHKEIENVITNGLVVAFLIGIVMSIIFIFMSKNFLTWMGIDPHLVQVGAPFLEIIGGSSVVIAIHASILPILRAHGYVRQSILVPVTISIINVVGNYLFLYGPLAYLDYGVAGVGISTAVANFVGMGLAIWMLRKYIGYTFHFKKLEQVSK------KLLYSILRLGLPSAGENLSYAGSQLVVTAIIAILGTEALTTKVYASTVSQFVALFAIALGQASQIIIGRAVGAKEIDKA-YKQGLRSWKIGLVVAIVVSVSIYLFAEPIMRLFTTNTEIIAMTKELFLLSIFLELGRATNIIIISSLNSTGDVRFPFICGLIVMWIVSLPFSYVLGISAGLGLVGVWLAYIIDEGVRAVLMYRRWRSKVWSLKSVI |
| 4HUK Chain:A ((16-442)) | -----------LTALALPMLLAQVAQVGIGFVDTVMAGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTGEAGETGRQGIWFGLILGIFGMILMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYASSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGVAT-MAVFWFSALALWI---YIAKEKFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFGEDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGV-SLVSGWVLAVITVLSLVLFRSPLASMYNDDPAVLSIASTVLLFAGLFQPADFTQCIASYALRGYKVTKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAVAL-------VWCLE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -346278 for 3688 contacts (-93.9/contact) +
2D Compatibility (PS) -39780 + (NN) 27061 + (LL) 2456
1D Compatibility (HY) -36000 + (ID) 4800
Total energy: -397341.0 ( -107.74 by residue)
QMean score : 0.151
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