Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNVLFIKANGLPAERSVSVALYEIFLTEYKKSHPDDNVTELDLFEADLPYYDVTMMSGLHKEAAGE---TLSPEEKRLADIANSYLDQFLAADKIVMAFPLWNFSIPAQFLTYLFYLNQAGKTFKYTANGPVGLVADKKIALLNARGGIYSDGPMQSFEMSLNYVKNVLAHFGISEPEMVIVEGHNAKPDQAKDIISAGAKEAVELAKIF
3W78 Chain:A ((2-211))
-TKVLFITANPNSAEGSFGMAVGEAFIEAYKNEHPQDEVVTIDLFNTTVPAIDADVFAAWGKFAAGEGFEALTEVQQQKVAAMNTNLETFMNADRYVFVTPMWNFSYPPVVKAYLDNVAIAGKTFKYTENGPVGLLEGKKALHIQATGGVYSEGAYAAVDFGRNHLKTVLGFVGVNDTEYIAVEGMNANPEKAQEIKEAAIANARELAKRF
General information:
TITO was launched using:
RESULT:
Template:
3W78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121156 for 1587 contacts (-76.3/contact) +
2D Compatibility (PS) -22349 + (NN) -11488 + (LL) 208
1D Compatibility (HY) -14400 + (ID) 4350
Total energy: -173535.0 ( -109.35 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_3W78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W78-query.scw
PDB file :
Tito_Scwrl_3W78.pdb
: