Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVVIENYGGKEELK--EKEVAMPKAGKNQVIVKEAATSINPIDWKLREGYLKQMMDWEFPIILGWDVAGVISEVGEGVTDWKVGDEVF------ARPETTRFGTYAEYTAVDDHLLAPLPEGISFDEAASIPLAGLTAWQALFDHAKLQKGEKVLIHAGAGGVGTLAIQLAKHA--GAEVITTASAKNHELLKSLGADQVIDYKEVNFKDVLSDIDVVFDTMGGQIETD-SYDVLKEGTGRLVSIVGISNEDRAKEKNVTATGIWLQPNGEQLKELGKLLANKTIKPIVGATFPFSEKGVFDAHALSETHHAVGKIVISFNK |
| 4IDB Chain:A ((25-329)) | -KAWVYSEYGKTSDVLKFDPSVAVPEIKEDQVLIKVVAASLNPVDFKRALGYFKDT-DSPLPTIPGYDVAGVVVKVGSQVTKFKVGDEVYGDLNETALVNPTRFGSLAEYTAADERVLAHKPKNLSFIEAASLPLAIETAHEGL-ERAELSAGKSVLVLGGAGGVGTHIIQLAKHVFGASKVAATASTKKLDLLRTLGADLAIDYTKENFEDLPEKFDVVYDAVG---ETDKAVKAVKEG-GKVVTIVGPATP--------PAILFVLTSKGSVLEKLKPYLESGKVKPVLDPTSPYPFTKVVEAFGYLESSRATGKVVV---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145044 for 2634 contacts (-55.1/contact) +
2D Compatibility (PS) -31326 + (NN) -6535 + (LL) 1352
1D Compatibility (HY) -24800 + (ID) 6650
Total energy: -213003.0 ( -80.87 by residue)
QMean score : 0.561
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