Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VIYLDNEDVLDQAYNFAMEEYALRSLDENETYFMFYRMKPTIIVGKNQNTLEEINHPFVKDHHIDVLRRLSGGGAVYNDEGNISFSMITKDDGNSFQNFAKFTEPVIRALRKLGVNAELSGRNDIEV----NGKKISGNAQFATKGRLYSHGTLLFDVDLSMLEKALQVDPEKYLSKGVKSVRSRVTTIREHLAEDIDILTFKQI---LLESIF---------------ETKDIPRYTFTEADKQGIEKLRTERYRNWDWTYGKSPKATIKRKKRFPAGTIEFQVSLEKGQVKEATIYGDFFGTEDVAELAEKIIGCRFERKSIQNAWQEINAKDYFGGIEKEAILDMLFE |
3A7R Chain:A ((9-313)) | -------DSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMA---GKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTVEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPG----ITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPNFAETFA-----------RQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQ---QECEA------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -103702 for 2216 contacts (-46.8/contact) +
2D Compatibility (PS) -30365 + (NN) -11261 + (LL) 3152
1D Compatibility (HY) -19600 + (ID) 5150
Total energy: -166926.0 ( -75.33 by residue)
QMean score : 0.464
|
|
|