Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGINTDTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMYKAMMKVFENLTENEIEELIRLNKKVETLLKKSK
3GFJ Chain:A ((6-100))
--------ENRIQIMSTIAKIYRAMSRELNRRLGELNLSYLDFLVLRATSDGPK-TMAYLANRYFVTQSAITASVDKLEEMGLVVRVRD--REDARKILIEITEKG-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GFJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36001 for 589 contacts (-61.1/contact) +
2D Compatibility (PS) -10010 + (NN) -2242 + (LL) 5216
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -50637.0 ( -85.97 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_3GFJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GFJ-query.scw
PDB file :
Tito_Scwrl_3GFJ.pdb
: