Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDILRDIGVIARALDSISNIEFKELNLAKGQFIYLVRICENQGIIQEKLVDILKIDRTTASRAIKNLEKNGLIIKKQNKNNKKNKLLFPTEKGQQLYPLIIRENEYSNAVALKGFTEAEINMLTDALKKVKENIADDWLYVKKGNKRSY
3BPX Chain:A ((14-140))
-------LSIILRSHRVFIGRELGHLNLTDAQVACLLRIHREPGIKQDELATFFHVDKGTIARTLRRLEESGFIEREQDPENRRRYILEVTRRGEEIIPLILKVEERWEDLLFRDFTEDERKLFRKMCRRLAEE----------------
General information:
TITO was launched using:
RESULT:
Template:
3BPX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37407 for 822 contacts (-45.5/contact) +
2D Compatibility (PS) -13509 + (NN) -3150 + (LL) 1516
1D Compatibility (HY) -10000 + (ID) 1750
Total energy: -64300.0 ( -78.22 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_3BPX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BPX-query.scw
PDB file :
Tito_Scwrl_3BPX.pdb
: