Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNILLICGSGASSGFMAAAIRKAAKKRGEQVTVKAASESQIDERINEIDYLLIGPHLAYMLDDLKQKVADKDVLVSIIPQATYGTLNGEKALDLILNMEG
2WY2 Chain:D ((2-87))
-KHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKP--VEVIDSLLYGKVDG------------
General information:
TITO was launched using:
RESULT:
Template:
2WY2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54463 for 611 contacts (-89.1/contact) +
2D Compatibility (PS) -9706 + (NN) -6908 + (LL) 1604
1D Compatibility (HY) -8800 + (ID) 1350
Total energy: -79623.0 ( -130.32 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_2WY2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WY2-query.scw
PDB file :
Tito_Scwrl_2WY2.pdb
: