Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVVKQKADYAALKEELIAYAYEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPVIEERVYPELIFKEPQSIIAIALAYPSKLKEAPVSKKGARRGVFARASWGIDYHTVLREKLALLETFLIERLPDVRMKSMVDTGELSDVAVAERAGIGWRGKNTLLITPEYGSWVYLGEMITNIPFEPDTP----ASDLCGSCNQCVKACPTGSLL-------------GEGKM----NPKICLSYLTQTKDFLDEKYREVLHNRLYGCDTCQVVCPYNRGHDFHFHEEMEPDPELVRPELKPLLHISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDKTAVPDLIDCLQNDPRPVIRGTAGWALRKIGGRDAEEAVERALQTEQDVQVLQELTAIPN |
| 4UR1 Chain:A ((272-417)) | --------------------------------------------------------------------------------------------------------------------------------------------NGVGQSVAFAVEAGLGQASRMGACITPEFGPNVRLTKVFTNMPLVPDKPIDFGVTEFCETCKKCARECPSKAITEGPRTFEGRSIHNQSGKLQWQNDYNKCLGYWPESGGY---------------CGVCVAVCPFTKG-NIWIHDGVE--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28934 for 679 contacts (-42.6/contact) +
2D Compatibility (PS) -11647 + (NN) -4924 + (LL) 21384
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -35221.0 ( -51.87 by residue)
QMean score : 0.513
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