Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQAYSIIGITDKDIREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEE-HQVDTAALETSEKWLVSVIDAALAAQNMAIAAESLGLGICFIGGIRNDVEQIAEILDLPPYTMPLFGLTIGHPVANKEKAKPRLPQDLVYHENSYKKMNPET--LAEYDKQIKTYYNERTAGKRVEGWSEQIARGLGRPSRLDLKAFLEKQHLNQK
1ZCH Chain:A ((1-243))
MNEVIKSLTDHRSIRSYTDEPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISELAGGQPWIDQAPVFLLFCADFNRAKIALEDLHDFKMEITNGLESVLVGAVDAGIALGTATAAAESLGLGTVPIGAVRGNPQELIELLELPKYVFPLSGLVIGHP-ADRSAKKPRLPQEAVNHQETYLNQDELTSHIQAYDEQMSEYMNKRTNGKETRNWSQSIASYYERLYYPHIREMLEKQ-----
General information:
TITO was launched using:
RESULT:
Template:
1ZCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111118 for 1744 contacts (-63.7/contact) +
2D Compatibility (PS) -26707 + (NN) -15045 + (LL) 516
1D Compatibility (HY) -14400 + (ID) 4500
Total energy: -171254.0 ( -98.20 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_1ZCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZCH-query.scw
PDB file :
Tito_Scwrl_1ZCH.pdb
: