Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDA---IRARKKIDSTL---EGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNFDGESSNDFIGRFGIGLLSCFIVSDEIVMISTS--QKDGGTTEWRGKADGTYSVRKIETDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEE----INSWTKQFSDKETLSTLSREQII--QYGEYI--LGTHFQDYFLIEN---ESGRTFGIAYMIPHAVQMNAIRKN-----TVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEALMKLLATHYLGF--------KALASED-------APFLKLIYPYL--PVRTLNGEEKLGDIIAKNDVIYYTYSVDDFRQIK-----DIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQP----EEMTDKLRPMTADEKQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKTVKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML |
| 1Y4U Chain:A ((9-489)) | -------FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKS--GT-----------IGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDR--GTEITLHLREGEDEFLDDWRVRSIISKYSDHIA-----LPVEIEKREEKDGETVISWEK-INKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQD----STVTRNLRNALTKRVLQMLEK-LAKDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYI-TADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEF-DGKPFQSVSKVDES-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178208 for 3023 contacts (-59.0/contact) +
2D Compatibility (PS) -43891 + (NN) -14261 + (LL) 14932
1D Compatibility (HY) -26000 + (ID) 5800
Total energy: -253228.0 ( -83.77 by residue)
QMean score : 0.338
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