Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRAILIGVLIILLIAMILIVLLPAILAMVGAVLGFWSLKKLLEARSVGEKVIYGVLIGVGALIILANLKGILVVVIIGAIIYFLTRNKNKPRKNDDVFDYPYNK |
3L1L Chain:A ((424-439)) | ---------------------------------------------------------------------------------YALNYNRLHKNPYPLD------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3620 for 45 contacts (80.4/contact) +
2D Compatibility (PS) -1714 + (NN) -1705 + (LL) 9796
1D Compatibility (HY) 0 + (ID) 150
Total energy: 9847.0 ( 218.82 by residue)
QMean score : 0.538
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