Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQASFVVIDETGIHARPATLLVQAASKYSSDVQIEYTGKKVNLKSIMGVMSLGIGKGADITIYTEGSDEKEAIEGLTEVLKKEGLAE
1KA5 Chain:A ((2-88))
-EQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK
General information:
TITO was launched using:
RESULT:
Template:
1KA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62943 for 723 contacts (-87.1/contact) +
2D Compatibility (PS) -9741 + (NN) -6154 + (LL) 208
1D Compatibility (HY) -11200 + (ID) 3100
Total energy: -92930.0 ( -128.53 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_1KA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KA5-query.scw
PDB file :
Tito_Scwrl_1KA5.pdb
: