Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEGFAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSIATHAVIANSTDENALRQLGIRNFEHVIVAIGEDIQSSILTTLILKEMGVKYVTAKATNDKHAKLLDKIGADRVVHPERDMGRRIAHYIVSKNMLDYLELSDEYSLVEISVSDPRFLGKSLVDLDFRNSFGVNIVGIKKDKQMIITPEANDVLHEGDILIVIGSDDDIERLQEKIQ
4J7C Chain:A ((9-218))
----FAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENVLNYIDLSDEYSIVEL-LATRKLDSKSIIDLNVRAKYGCTILAIKHHGDICLSPAPEDIIREQDCLVIMGHKKDIKRFE----
General information:
TITO was launched using:
RESULT:
Template:
4J7C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152655 for 1579 contacts (-96.7/contact) +
2D Compatibility (PS) -22396 + (NN) -3921 + (LL) 668
1D Compatibility (HY) -25600 + (ID) 5500
Total energy: -209404.0 ( -132.62 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_4J7C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J7C-query.scw
PDB file :
Tito_Scwrl_4J7C.pdb
: