Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTETRTEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYITVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGSD--ARAGEKNGRADTIILATANKQQNAVEMVSIPRDTKVDYGNGDIG---KINASYSNGGPSGTVSAVEKLMPGVPVDYFISINMEGFKDLVDAVGGITVYNDIDLTEVNSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSNFESIMKAVGDNFQTNMTLTDITSMAANYSSVL-KNVDSQELKGEGEMIYSESYGFDLYYFAPDKTDLERIITMFKKSLDITE |
3NXH Chain:A ((73-331)) | --------------------------------------------------------------------KKKPFSILFMGIEDYATKGQK-GRSDSLIVVTLDPKNKTMKMLSIPRDTRVQLA-----SKTKINAAYSKGGKDETVETVENFLQ-IPIDKYVTVDFDGFKDVINEVGGIDVDVP-------------EMHLNGEEALAYA---------DFGRNDRQKQILNALIDRMS--------DKIAEKASENVETNIRITEGLALQQIYSGFTSKKIDTLSITGSDLYLGPNN----TYYFEPDATNLEKVRKTLQEHLDYT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 35064 for 1486 contacts (23.6/contact) +
2D Compatibility (PS) -20718 + (NN) 8145 + (LL) 5988
1D Compatibility (HY) 8400 + (ID) 1050
Total energy: 35829.0 ( 24.11 by residue)
QMean score : 0.106
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