Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQKTFIKVTCSILTISDTRNLDTDTSGQLIQSALETAGHEVISRVVVPDDVTLIKQKINE-LAANGSFCLITNGGTGIARRDVTYEALFATIQQEIPGFGEIFRMLSYEEVGSRAMVSRAFAGFSESGLLLFALPGSSNACQLAVQKLIIPEL----------PHLIAERQK
1MKZ Chain:A ((8-168))
-----FIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGFGEVFRMLSFEEIGTSTLQSRAVAGVANKTLIL-AMPGSTKACRTAWENIIAPQLDARTRPCNFHPHL------
General information:
TITO was launched using:
RESULT:
Template:
1MKZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120372 for 1236 contacts (-97.4/contact) +
2D Compatibility (PS) -15715 + (NN) -3565 + (LL) 1416
1D Compatibility (HY) -12400 + (ID) 2950
Total energy: -153586.0 ( -124.26 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_1MKZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MKZ-query.scw
PDB file :
Tito_Scwrl_1MKZ.pdb
: