Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKWMVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPKSPAKTEAFSFSPSGFKVSTVESILGGDVTTTYLSSSKSFQKDFEALTLFINQYKVEHVINPTKEVSASNPESYLANKNGYVITLDISIKN--NSKKDKMYKADQISLLGASKSVGGSLDNFIPSGFHLIGSSSDPYNFTAGKTARGLLTFTMDEATYNDLAKDSQIGVPDPSRFDSSSTKGSSQDNVVAPFPIK |
3M6Q Chain:A ((7-62)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------PDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDQIGLSAPQVGLNVQLMVFNPAG--------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3M6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 6006 for 286 contacts (21.0/contact) +
2D Compatibility (PS) -5628 + (NN) -534 + (LL) 9668
1D Compatibility (HY) -2800 + (ID) 950
Total energy: 5762.0 ( 20.15 by residue)
QMean score : -0.092
|
|
|