Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVITYGTFDLLHWGHIHLLKRAKALGDYLIVAISSDEFNRIKHKEAYHSYEHRKLIIEAIRYVDEVIPENNWEQKRDDIEKYGIDVFVMGDDWEGEFDFLKDVCEVVYLPRTEGISTSQIKDELK
2B7L Chain:A ((1-115))
MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFLKDKCEVIYLKRTE------------
General information:
TITO was launched using:
RESULT:
Template:
2B7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63512 for 883 contacts (-71.9/contact) +
2D Compatibility (PS) -12700 + (NN) -5711 + (LL) 684
1D Compatibility (HY) -18000 + (ID) 4100
Total energy: -103339.0 ( -117.03 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2B7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B7L-query.scw
PDB file :
Tito_Scwrl_2B7L.pdb
: