Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLVKYFAIFGVVFSMFFSLLLFVTIVFAEEDDTRSSREEMIQQGGLNVSAEVLAHRPMVEKYCKEFGIEEYVNYILAIMQVESGGTAEDVMQSSESLGLPPNSLSTEESIKQGCKYFSELLASAESNGCDINTVIQSYNYGGGFINYVASNGKKYSYELAESFSKDKAGGVKVDYPNPIAIPVNGGWRYNYGNQFYVLLVSQYLTPVQFDDETVQAIMNEALKYEGYPYVFGGSS---PS---------TSFDCSGLTQWSYAVAGIQLPRVAQAQYDATQHIPLSEAKAGDLVFFHSTYDAGSYVTHVGIYVGNNQMYHAGDPIGYTNLTDSYWQAHLIGAGRIIK |
| 3PBI Chain:A ((110-214)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QAVEYVIRRAGSQMGVPYSWGGGSLQGPSKGVDSGANTVGFDCSGLVRYAFAGVGVLIPRFSGDQYNAGRHVPPAEAKRGDLIFYGPGGG-----QHVTLYLGNGQMLEA-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43391 for 653 contacts (-66.4/contact) +
2D Compatibility (PS) -10091 + (NN) -5862 + (LL) 14856
1D Compatibility (HY) -8000 + (ID) 2000
Total energy: -54488.0 ( -83.44 by residue)
QMean score : 0.390
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