Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKGGAGHGSLIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHIELQYTARASHALEKAFGAPVGKAFGLMVGAPAGIGVVMADTAVKSANVDVVAYSSPADGT-SFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKN-DRPSYI
3IO0 Chain:A ((76-304))
-----PTMTEFVGTAGGDTVGLVIANVDSLLHKHLGLDNTCRSIGIISARVGAPAQMMAADEAVKGTNTEVATIELPRDTKGGAGHGIFIVLKAADVSDARRAVEIALKQTDKYLGNVYLCDAGHLEVQYTARASLIFEKAFGAPSGQAFGIMHAAPAGVGMIVADTALKTADVKLITYGSPTNGVLSYTNEILITISGDSGAVLQSLTAARKAGLSILRSMGQDPVSMSKPTF-
General information:
TITO was launched using:
RESULT:
Template:
3IO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101997 for 2032 contacts (-50.2/contact) +
2D Compatibility (PS) -24507 + (NN) -14231 + (LL) 696
1D Compatibility (HY) -19600 + (ID) 6500
Total energy: -166139.0 ( -81.76 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_3IO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IO0-query.scw
PDB file :
Tito_Scwrl_3IO0.pdb
: