Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS |
2VPZ Chain:A ((646-672)) | ------------------------------------------------------------------------------------------------------------------------------------------ENEVWIHKEEAKRLGLKEGDYVMLVNQ---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8192 for 99 contacts (-82.7/contact) +
2D Compatibility (PS) -3008 + (NN) -756 + (LL) 13560
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -696.0 ( -7.03 by residue)
QMean score : 0.475
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