Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNDKLPASVLSVKVVSNVDNGLFKQLDLKPHQRSLGIITSDCDDVTYTALDEATKAAEVDVVYAKSMYAGAGNASTKFAGEVIGIIAGPSPAEVKSGLAVAVDFIENGASFVSANEDDSVPYFAHCVSRTGTFLSKEANVAEGEAIAYLIAPPLEAMYALDAALKAADVTIGAFYGPPSETNFGGALLTGSQSACKAACDAFKMAVENVAENPLQY
4TM6 Chain:A ((1-217))MKNDLIRPNVLSVKIISNVSPEMAKKLELEPHHKSLGLITADCDDVTYTALDEATKAAEVDVVYARSMYAGAGNASTKLAGEVIGILAGPSPAEVRSGLNATLDFIDSGVGFVSANEDDSICYYAQCVSRTGSYLSKTAGIREGEALAYLVAPPLEAMYALDAALKAADVEMCEFFAPPTETNFAGALLTGSQSACKAACDAFAEAVQSVASNPLGF


General information:
TITO was launched using:
RESULT:

Template: 4TM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126615 for 1833 contacts (-69.1/contact) +
2D Compatibility (PS) -23706 + (NN) -14781 + (LL) 0
1D Compatibility (HY) -25600 + (ID) 7950
Total energy: -198652.0 ( -108.38 by residue)
QMean score : 0.643

(partial model without unconserved sides chains):
PDB file : Tito_4TM6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TM6-query.scw
PDB file : Tito_Scwrl_4TM6.pdb: