Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYIKNPAKIEEKSFEIIQQIIDDIRPDYTFQNKLEEAIIKRAIHTTADFDYLDSLVFQQDAIAKIIHVLQNKGTIFTDTNMALSGINKRLLDELGCKYHCYVSDPETMEIAKQHGITRSMAGIKLASLKDGPKLFVLGNAPTAVYKIIEMVESGQLQADAVVAVPVGFVGAAECKEEILETD--IPAIVARGRKGGSNLAAAIINAILITM
1F2V Chain:A ((5-205))
-DYIRDGNAIYERSFAIIRAEADLSR----FSEE-EADLAVRMVHACGSVEATRQFVFSPDFVSSARAALKAGAPILCDAEMVAHGVTRARLPA-GNEVICTLRDPRTPALAAEIGNTRSAAALKLWSERLAGSVVAIGNAPTALFFLLEMLRDGAPKPAAILGMPVGFVGAAESKDALAENSYGVPFAIVRGRLGGSAMTAAALNSL----
General information:
TITO was launched using:
RESULT:
Template:
1F2V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148665 for 1761 contacts (-84.4/contact) +
2D Compatibility (PS) -22064 + (NN) -10574 + (LL) 1128
1D Compatibility (HY) -9600 + (ID) 3400
Total energy: -193175.0 ( -109.70 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_1F2V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F2V-query.scw
PDB file :
Tito_Scwrl_1F2V.pdb
: