Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKAILVVSFGTSYPETREKTIEACEKRVAHEFPDYTVFRAFTSNKIIKKLKTRDNMHINTPSQALNQLKELGYKEVIIQSLHIISGGEFEKITAQVEKFKP---DFDSIIVSQPLLDSMEDYEKAIEAIRHQMPP-LKEQEALILMGHGSKHHAFSAYACLDHML--LNEPIYLCAVESYPGLDQVIERLQQADIKKAHLMPFMLVAGDHATNDMASDEENSWKSTLEQAGIQTECHLQGLGENPLIQSQFIDHIHTAIERVKTRG
2XVX Chain:A ((9-269))
-KTGILLVAFGTSVEEAR-PALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRA-EGIAAPSPAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLPLIGTTADAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLVGTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEAKPVLHGTAESDAVAAIWLRHLDDALARLN---
General information:
TITO was launched using:
RESULT:
Template:
2XVX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -209215 for 2205 contacts (-94.9/contact) +
2D Compatibility (PS) -28002 + (NN) -12052 + (LL) 392
1D Compatibility (HY) -17200 + (ID) 4500
Total energy: -270577.0 ( -122.71 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_2XVX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XVX-query.scw
PDB file :
Tito_Scwrl_2XVX.pdb
: