Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTL--GAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
3KE5 Chain:A ((21-202))
MKLYTKTGDKGTTSVIGG-RVDKDDIRVEAYGTIDEANSHIGYAMTKLQGGAFIDIYNELENIQHELFDCGGDLAIVEQKIPYKVTIVMVESLERKIDLYIEEAPPLERFILPGGSEAAATIHIARTVVRRAERSIVSLQKEVKINEVVLKYVNRLSDYLFAIARVINARLQVKDVEYNRSAV-------
General information:
TITO was launched using:
RESULT:
Template:
3KE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66851 for 1391 contacts (-48.1/contact) +
2D Compatibility (PS) -19438 + (NN) -7298 + (LL) 508
1D Compatibility (HY) -16800 + (ID) 5250
Total energy: -115129.0 ( -82.77 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_3KE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KE5-query.scw
PDB file :
Tito_Scwrl_3KE5.pdb
: