Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSIRYIVKTDVAETFEIIKAGQVGSNIVFSEVRTFDFGELATLACEKFYFRSSNRAALFV-------TINNFHGETEVTIISTGSSNGFFTGIDWGAAFDYMHSVVADLKRVAIREVAIEKQEEI
3EUK Chain:A ((23-136))
---------------------------------RTFDFDELVTTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTSSSRDKGLYGKLKAGVCYAVLETVNSRAQRI-------------
General information:
TITO was launched using:
RESULT:
Template:
3EUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5245 for 315 contacts (-16.7/contact) +
2D Compatibility (PS) -7648 + (NN) 1283 + (LL) 4664
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: -9246.0 ( -29.35 by residue)
QMean score : -0.279
(partial model without unconserved sides chains):
PDB file :
Tito_3EUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EUK-query.scw
PDB file :
Tito_Scwrl_3EUK.pdb
: