Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKSVNVIGAGLAGSEAVWQLVNRGVKVDLYEMRPVKQTPAHHTDKFAELVCTNSLRANGLTNAVGVIKEEMRMLDSIIIEAADKASVPAGGALAVDRHEFSGYITDKVKNHPLVTVHTEEVTTIPEGPTIIATGPLTSPALADEIKQLTGEEYLYFYDAAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMSEEEFNAFYEALVTAETAALKEFEKEVFFEGCMPIEVMAKRGIKTMLFGPLKPVGLEDPKTGKRPYAVLQLRQDDAAGTLYNMVGFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAGQMTGVEGYVESAASGLAAGINAANFIQEKELVVFPTETAIGSLAHYITSASKKSFQPMNVNFGLFPELETKIRAKQERNEKLAERALNAIKKVAEEL |
3G5S Chain:A ((2-424)) | --ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSLVMEAADLARVPAGGALAVDREEFSGYITERLTGHPLLEVVREEVREIPPGITVLATGPLTSEALAEALKRRFGDHFLAYYDAASPIVLYESIDLTKCFRAGRY------YLNCPMTEEEYRRFHQALLEAQRHTPH-------FEACVPVEELARRGYQTLLFGPMKPVGLVDPRTGKEPFAVVQLRQEDKAGRMWSLVGFQTGLKWPEQKRLIQMIPGLENAEIVRYGVMHRNTYLNAPRLLGETLEFREAEGLYAAGVLAGVEGYLESAATGFLAGLNAARKALGLPPVAPPEESMLGGLVRYLATANPEGFQPMYANWGLVPPVEGRM-GKKEKRQAMYRRGLEAF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223536 for 3752 contacts (-59.6/contact) +
2D Compatibility (PS) -43522 + (NN) -14358 + (LL) 2300
1D Compatibility (HY) -40800 + (ID) 11250
Total energy: -331166.0 ( -88.26 by residue)
QMean score : 0.559
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