Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVALNPDAE
4NOY Chain:D ((3-71))
--QGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNWTVLLDVEGKQQLVFKHAISTFSPQKNVA------
General information:
TITO was launched using:
RESULT:
Template:
4NOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39930 for 421 contacts (-94.8/contact) +
2D Compatibility (PS) -7488 + (NN) -1006 + (LL) 400
1D Compatibility (HY) -10400 + (ID) 3350
Total energy: -61774.0 ( -146.73 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_4NOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NOY-query.scw
PDB file :
Tito_Scwrl_4NOY.pdb
: