Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKYDDKHFFEQYSQMPRSKEGLQAAGEWHEFKKLLPDFHQKVVLDLGCGFGWHCIYAAEQGAKKVVGVDLSARMLTEAKHKTTSPIVH---YERRAMENIDIEPETYDIVLSSLALHYVASFNDICQKVNTNLITGGSFVFSVEHPIFTADGR-QDWFTDE--AGNKLHW-PVDRYFNESIRTSHFLGEDVQKYHRTLTTYIQTLLKNGFQINSIIEPEPAPELKDLPEMQDEYRRPMMLIISATKN
3E8S Chain:A ((56-210))
---------------------------------------------VLDLGCGEGWLLRALADRGI-EAVGVD-GDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKD-YDLICANFALLH-QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYF------------------RTLASWLNALDMAGLRLVSLQEPQ----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3E8S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83357 for 997 contacts (-83.6/contact) +
2D Compatibility (PS) -16093 + (NN) -5927 + (LL) 6444
1D Compatibility (HY) -10800 + (ID) 2650
Total energy: -112383.0 ( -112.72 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_3E8S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E8S-query.scw
PDB file :
Tito_Scwrl_3E8S.pdb
: