Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKEVLSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV
1WQG Chain:A ((2-185))
-IDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV
General information:
TITO was launched using:
RESULT:
Template:
1WQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47494 for 1332 contacts (-35.7/contact) +
2D Compatibility (PS) -20490 + (NN) -12787 + (LL) 208
1D Compatibility (HY) -14400 + (ID) 4750
Total energy: -99713.0 ( -74.86 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_1WQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WQG-query.scw
PDB file :
Tito_Scwrl_1WQG.pdb
: