Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LNVRANRVSEQMKKELGDILNRKIKDPRLG--FVTVTGVDVTGDLQEAKVFISILGTDKEKENTLLALAKAHGFIRSEIGRRIRLRKVPEMSFEIDNSIAYGNRIDELLRDLNNDQ
2KZF Chain:A ((24-101))
---------------------QQLRDPRLKKDFVTFSRVELSKDKRYADVYVSFLGTPEERKETVEILNRAKGFFRTFIAKNLRLYVAPEIRFYEDKGI-----------------
General information:
TITO was launched using:
RESULT:
Template:
2KZF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29951 for 452 contacts (-66.3/contact) +
2D Compatibility (PS) -7975 + (NN) -2549 + (LL) 2360
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -46815.0 ( -103.57 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_2KZF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KZF-query.scw
PDB file :
Tito_Scwrl_2KZF.pdb
: